Supplementary code for analyzing bursts in product interarrival times.

Last modification: 11 April 2008

M Dobrzynski and FJ Bruggeman (2009) Elongation dynamics shape bursty transcription and translation, PNAS 106(8):2583-2588 (link to journal site)
Centre for Mathematics and Computer Science (CWI), Amsterdam, The Netherlands

For questions and comments please email MD

Content of the directory:
  1. C code for Gillespie simulation of the basic burst-generating model (tar.gz file)
  2. C code for Gillespie simulation of motor protein progression along the polymer chain (tar.gz file)
  3. Matlab script to produce histograms with logarithmic binning (Matlab file)
  4. Matlab script to generate the sequence size function (Matlab file)
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Created by MD.